miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST001299
species:
Lactuca perennis
miRNA family:
MIRf1352
source:
miRNEST
Taxonomy by NCBI:
Lactuca perennis
Lactuca
Lactucinae
Cichorieae
Cichorioideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GACATGGAGTTTAGTTGGTGT
miRNA*
AACCAGATGTTTCTAGTGTTTG
mismatches:
3
bulges:
2
View larger
pre-miRNA
GTTGTGAAGTA
GACATGGAGTTTAGTTGGTGT
GTGACTGTGTGTATGTATAAGAACAAAATATGGGCCCACAG
AACCAGATGTTTCTAGTGTTTG
GAGAG
ATG
dot-bracket secondary structure
.........((
(((((((((..((.(((((.(
(((.((((((...(((......)))..))))))...)))).
.))))).)).))))).))))))
.....
...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record