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ABOUT THIS RECORD
ID:
MNEST001344
species:
Lactuca serriola
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Lactuca serriola
Lactuca
Lactucinae
Cichorieae
Cichorioideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCGTTT
miRNA*
ACAGTGAAGAGGAAGAAGATA
mismatches:
5
bulges:
0
View larger
pre-miRNA
GAAGTTGAAGGAGATGAAG
ACAGTGAAGAGGAAGAAGATA
CAGGTATGGGGGAAATTGATCTGGACAAAACAGCAGCAAGTTTGGACGAAAATTAAAATA
TCA
TCATCATCATCATCATCGTTT
AATCAATCTGCTTGAG
dot-bracket secondary structure
.......(((.((((((((
((.((((.((.((.((.(((.
..(((((..((....(((.(((((((.............))))))))))...))...)))
)))
)).)).)).)).)))).))))
..)).)))).)))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record