ABOUT THIS RECORDspecies: Leymus cinereus x Leymus triticoides
miRNA family: MIR1132
source: miRNEST
Taxonomy by NCBI:
Leymus cinereus x Leymus triticoides Leymus Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATTATGGAACGGAGGGAGTA miRNA* CTTCCTCCGTCCCATTGTA mismatches: 1 bulges: 2 |
pre-miRNA
CTTAATGGGCATGTAATATGTACTTCCTCCGTCCCATTGTAATAACGTCATAATATTATATTATGGAACGGAGGGAGTAATATTATATATGTACCTAA
dot-bracket secondary structure
.....((((.(((((((((.((((((((((((.(((((((((((.........)))))))..)))).))))))))))))))))))))).....)))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTTAATGGGCATGTAATATGTACTTCCTCCGTCCCATTGTAATAACGTCATAATATTATATTATGGAACGGAGGGAGTAATATTATATATGTACCTAA
dot-bracket secondary structure
.....((((.(((((((((.((((((((((((.(((((((((((.........)))))))..)))).))))))))))))))))))))).....)))).
SIMILARITIES| miRBase osa-MIR819i: 0.00007 PMRD osa-miRf11372-akr: 0.00007 microPC miR1436: 0.000005 | UniProt no hits RFAM MIR806: 0.00002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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