ABOUT THIS RECORDspecies: Leymus cinereus x Leymus triticoides
miRNA family: MIR2033
source: miRNEST
Taxonomy by NCBI:
Leymus cinereus x Leymus triticoides Leymus Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CATTTGTTTACAGAGGGAGTA miRNA* CTCCCTCTGTATAAAAGTGA mismatches: 4 bulges: 1 |
pre-miRNA
ACTTACGTGATTTNCNNTTAGTACTCCCTCTGTATAAAAGTGACCTAAAACGTCTTACATTTGTTTACAGAGGGAGTATTTCCTTCATGCCACACCA
dot-bracket secondary structure
)....(((((.........(((((((((((((((..(((..(((.......))).....)))...)))))))))))))))....)))))........
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
Source sequences
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ACTTACGTGATTTNCNNTTAGTACTCCCTCTGTATAAAAGTGACCTAAAACGTCTTACATTTGTTTACAGAGGGAGTATTTCCTTCATGCCACACCA
dot-bracket secondary structure
)....(((((.........(((((((((((((((..(((..(((.......))).....)))...)))))))))))))))....)))))........
SIMILARITIES| miRBase no hits PMRD tur-miR1120: 1.0E-6 microPC no hits | UniProt no hits RFAM 2MIR1122: 2.0E-5 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
