ABOUT THIS RECORDspecies: Leymus cinereus x Leymus triticoides
miRNA family: MIRf34
source: miRNEST
Taxonomy by NCBI:
Leymus cinereus x Leymus triticoides Leymus Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTTGAGACAGAGGGAGTAGC miRNA* TACTCCCTCTGTCTATAGTG mismatches: 4 bulges: 1 |
pre-miRNA
TTAATATATATAATACTCCCTCTGTCTATAGTGTCAAAAAACGTCTTACATTTTGAGACAGAGGGAGTAGCTTATAGATT
dot-bracket secondary structure
).(((.((((...((((((((((((((..(((((.............)))))...))))))))))))))...)))).)))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTAATATATATAATACTCCCTCTGTCTATAGTGTCAAAAAACGTCTTACATTTTGAGACAGAGGGAGTAGCTTATAGATT
dot-bracket secondary structure
).(((.((((...((((((((((((((..(((((.............)))))...))))))))))))))...)))).)))
SIMILARITIES| miRBase tae-MIR1130: 6.0E-5 PMRD tae-miR1130: 6.0E-5 microPC miR1130: 2.0E-7 | UniProt no hits RFAM 2MIR1122: 1.0E-12 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
