ABOUT THIS RECORDspecies: Leymus cinereus x Leymus triticoides
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Leymus cinereus x Leymus triticoides Leymus Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTACTCCCTCCGTCCATAATA miRNA* TTCCGGACGGAGGAAGTACTA mismatches: 5 bulges: 0 |
pre-miRNA
TCACATGACAGCTACTCCCTCCGTCCATAATAAGTTGTCGCTCAAACGGATGTATCTAGCACTAATTCCGGACGGAGGAAGTACTATTTTCTTA
dot-bracket secondary structure
......((.((.((((.(((((((((..(((.(((....(((.....(((....))))))))).)))..))))))))).)))))).))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TCACATGACAGCTACTCCCTCCGTCCATAATAAGTTGTCGCTCAAACGGATGTATCTAGCACTAATTCCGGACGGAGGAAGTACTATTTTCTTA
dot-bracket secondary structure
......((.((.((((.(((((((((..(((.(((....(((.....(((....))))))))).)))..))))))))).)))))).))......
SIMILARITIES| miRBase tae-MIR1133: 0.00007 PMRD tae-miR1133: 0.00007 microPC no hits | UniProt no hits RFAM MIR1122: 0.00002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
