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ABOUT THIS RECORD

ID: MNEST001389
species: Leymus cinereus x Leymus triticoides
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Leymus cinereus x Leymus triticoides Leymus Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTCCGTTCCTAAATATAAGTC

miRNA*
 CTTATATTTAGAAACGGAGGG

mismatches: 2
bulges: 0
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pre-miRNA
 TCAACAGGATTCTACTCCCTCCGTTCCTAAATATAAGTCTTTTTAGAGATTCCAATATGGACTACATACGAAGCAAAATAAGTAAATCTACACTCTAAAA
TACGTCTATATACATCCGTATGTAGTTTGTATTGAAATCTCTAAAAGAACTTATATTTAGAAACGGAGGGAGTAGTAGGCTAGCT

dot-bracket secondary structure
......((...((((((((((((((.((((((((((((.((((((((((((.((((((((((((((((((...........(((................
))).............)))))))))))))))))).)))))))))))).)))))))))))).))))))))))))))....))....


SIMILARITIES
miRBase tae-MIR1122: 6e-44

PMRD tae-miR1122: 6e-44

microPC miR1436: 1e-26		UniProt no hits

RFAM MIR1122: 2e-56		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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