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ABOUT THIS RECORD
ID:
MNEST001390
species:
Leymus cinereus x Leymus triticoides
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Leymus cinereus x Leymus triticoides
Leymus
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTACTCCCTCCGTTCCTAAAT
miRNA*
TTAGAAACGGAGGGAGTAGTA
mismatches:
1
bulges:
0
View larger
pre-miRNA
TCAACAGGATT
CTACTCCCTCCGTTCCTAAAT
ATAAGTCTTTTTAGAGATTCCAATATGGACTACATACGAAGCAAAATAAGTAAATCTACACTCTAAAA
TACGTCTATATACATCCGTATGTAGTTTGTATTGAAATCTCTAAAAGAACTTATAT
TTAGAAACGGAGGGAGTAGTA
GGCTAGCT
dot-bracket secondary structure
......((...
((((((((((((((.((((((
((((((.((((((((((((.((((((((((((((((((...........(((................
))).............)))))))))))))))))).)))))))))))).))))))))
)))).))))))))))))))..
..))....
SIMILARITIES
miRBase
tae-MIR1122
:
6e-44
PMRD
tae-miR1122
:
6e-44
microPC
miR1436
:
1e-26
UniProt
no hits
RFAM
MIR1122: 2e-56
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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