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ABOUT THIS RECORD

ID: MNEST001394
species: Leymus cinereus x Leymus triticoides
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Leymus cinereus x Leymus triticoides Leymus Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTACTCCCTCCGTTCCTAAAT

miRNA*
TTAGAAACGGAGGGAGTAGAT

mismatches: 1
bulges: 0

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pre-miRNA
GTAGATAGTTGCTACTCCCTCCGTTCCTAAATATAAGTCTTTTTAGAGATTCCAATATGAACCACATACGGAGCAAAATGACTGATTCAACACTTTAAAA
TACGTCTATATACATCCATATGTAGTCCGTATTGTGAAATCTCTAAAAGGACTTATATTTAGAAACGGAGGGAGTAGATAACAGCTT


dot-bracket secondary structure
.......((((((((((((((((((.(((((((((((((((((((((((((((((((((.((.(((((.(((.......(((..(((...........))
)..)))........))).))))).)).))))))).).))))))))))))))))))))))))).)))))))))))))).)))).....



SIMILARITIES
miRBase tae-MIR1126: 8e-31

PMRD tae-miR1126: 8e-31

microPC miR1436: 1e-17
UniProt no hits

RFAM MIR1122: 1e-48
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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