ABOUT THIS RECORDspecies: Leymus cinereus x Leymus triticoides
miRNA family: MIRf34
source: miRNEST
Taxonomy by NCBI:
Leymus cinereus x Leymus triticoides Leymus Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTATGGGACAGAGGGAGTATA miRNA* TACTCCCTCTGTCCTCATA mismatches: 2 bulges: 2 |
pre-miRNA
TGATCTTAGTAGATACTCCCTCTGTCCTCATATTGGATGTAATAACGTCTTATATTATGGGACAGAGGGAGTATAGTGATCTAAA
dot-bracket secondary structure
.((((.......((((((((((((((((.((((.((((((....)))))).))))...))))))))))))))))...))))....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGATCTTAGTAGATACTCCCTCTGTCCTCATATTGGATGTAATAACGTCTTATATTATGGGACAGAGGGAGTATAGTGATCTAAA
dot-bracket secondary structure
.((((.......((((((((((((((((.((((.((((((....)))))).))))...))))))))))))))))...))))....
SIMILARITIES| miRBase tae-MIR1120: 0.00002 PMRD osa-miRf12035-akr: 0.000004 microPC miR1436: 0.00006 | UniProt no hits RFAM MIR1122: 0.00000000008 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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