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ABOUT THIS RECORD

ID: MNEST001406
species: Linum usitatissimum
miRNA family: miR162
source: miRNEST

Taxonomy by NCBI:
Linum usitatissimum Linum Linaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAGGCAGCGGTTCATCGAT

miRNA*
CGATAAACCTCTGCATCCAGC

mismatches: 3
bulges: 0

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pre-miRNA
GGTTGTGAAGAGGGAGGGAACACACGGAGTTTGGAGGCAGCGGTTCATCGATCTCTTCATGGTTTATGTGGGTTCATCCGATCACAAAAACACGTGAATC
GATCGATAAACCTCTGCATCCAGCAACCCCCCTAGTTTCTCCCTTCCTACCT


dot-bracket secondary structure
(((...((..(((((((((......((.(((((((.((((.((((.(((((((..((((((((((.(((((..((....))))))).)))).))))))..
))))))).)))).)))).))))..)))))......)))))))))))..))).



SIMILARITIES
miRBase csi-MIR162: 0.0000000005

PMRD rco-miR162: 0.0000000005

microPC miR162: 0.00000000003
UniProt no hits

RFAM MIR162_2: 0.000000009
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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