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ABOUT THIS RECORD

ID: MNEST001407
species: Linum usitatissimum
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Linum usitatissimum Linum Linaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTGGGAACAGACAGAGCATGT

miRNA*
ATGCCCTGCCTCTTCCCTGGCC

mismatches: 4
bulges: 1

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pre-miRNA
CGAGGAAAGAAGGAAGACGATAAAAAAAGAGGCTGGGAACAGACAGAGCATGTATAGAGCTTACTTACGGAAACCCTTTTGTTTTGACCCTTCCCATGCC
CTGCCTCTTCCCTGGCC
TTTTTCCCTCTTCTCTTCCACCCTCTTTT


dot-bracket secondary structure
.((((...(((((((((........((((((((((((((.((.(((.(((((....(((.......((((((....))))))........))).))))).
))).)).))))).))))
)))))...))))).))))...))))....



SIMILARITIES
miRBase ptc-MIR408: 0.00003

PMRD ptc-miR408: 0.00003

microPC miR408: 0.00003
UniProt no hits

RFAM MIR408: 0.0005
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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