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ABOUT THIS RECORD
ID:
MNEST001408
species:
Linum usitatissimum
miRNA family:
MIR408
source:
miRNEST
Taxonomy by NCBI:
Linum usitatissimum
Linum
Linaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCCCTGCCTCTTCCCTGGCC
miRNA*
CTGGGAACAGACAGAGCATG
mismatches:
3
bulges:
1
View larger
pre-miRNA
GAGGAAAGAAGGAAGACGATAAAAAAAGAGG
CTGGGAACAGACAGAGCATG
TATAGAGCTTACTTACGGAAACCCTTTTGTTTTGACCCTTCCCA
TGCCC
TGCCTCTTCCCTGGCC
TTTTTCCCTCTTCTCTTCCACCCTCTTT
dot-bracket secondary structure
((((...(((((((((........(((((((
(((((((.((.(((.(((((
....(((.......((((((....))))))........))).))
))).)
)).)).))))).))))
)))))...))))).))))...))))...
SIMILARITIES
miRBase
ptc-MIR408
:
0.00003
PMRD
ptc-miR408
:
0.00003
microPC
miR408
:
0.00003
UniProt
no hits
RFAM
MIR408: 0.0005
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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