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ABOUT THIS RECORD

ID: MNEST001409
species: Liriodendron tulipifera
miRNA family: miR3630
source: miRNEST

Taxonomy by NCBI:
Liriodendron tulipifera Liriodendron Magnoliaceae Magnoliales magnoliids Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTTGGGAATCTCTCTGATGCA

miRNA*
CTTTGGATGATATTTCCAAGCC

mismatches: 5
bulges: 1

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pre-miRNA
GGTGACTTGGTCTTGGGAATCTCTCTGATGCAATATCCTACACAAAACAACCGAAAAAAAAAAGAAGAGCAGAAAAGAGCTTAGTGATGCAAAGTTCTCA
TCTTCAAATCCTTTGTTTCACTGTGGATGGATTTTTGAATCTTAATTTCTTGTTTTGTTTAGACTTTGGATGATATTTCCAAGCCGTTGCTTG


dot-bracket secondary structure
((((((..((.(((((((((.(((((((.........(((.(((((((((..((((........((((.((((((......((((((.((((((......
..........)))))).))))))........))))))..))))..))))))))))))).)))...))))).)).)))))))))))))))))..



SIMILARITIES
miRBase vvi-MIR3630: 0.0006

PMRD no hits

microPC no hits
UniProt no hits

RFAM snoR44_J54: 0.000003
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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