ABOUT THIS RECORDspecies: Lolium perenne
miRNA family: MIRf134
source: miRNEST
Taxonomy by NCBI:
Lolium perenne Lolium Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACATGGCTGATTGTCAAGTTC miRNA* GCGTTGATTCGTGGCCATCTTG mismatches: 5 bulges: 1 |
pre-miRNA
TACGGCTTCAGGCGTTGATTCGTGGCCATCTTGTAAGGAGGCAAGCTGTTTCGACACTTCGTGCAACATGGCTGATTGTCAAGTTCCAAGCTATC
dot-bracket secondary structure
...(((((..(((.(((((...(((((((.(((((.((((................)))).))))).)))))))...))))))))..)))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TACGGCTTCAGGCGTTGATTCGTGGCCATCTTGTAAGGAGGCAAGCTGTTTCGACACTTCGTGCAACATGGCTGATTGTCAAGTTCCAAGCTATC
dot-bracket secondary structure
...(((((..(((.(((((...(((((((.(((((.((((................)))).))))).)))))))...))))))))..)))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q8L4D8|IQD31_ARATH: 0.001 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
