miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST001416
species: Lolium perenne
miRNA family: MIR157
source: miRNEST

Taxonomy by NCBI:
Lolium perenne Lolium Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGACAGAAGAGAGTGAGCAC

miRNA*
GCTCACTGCTCTATCTGTCAGCC

mismatches: 0
bulges: 2

View larger
pre-miRNA
GTGTGTGGAAGTTGACAGAAGAGAGTGAGCACCCATGGTGTTTCCTTTGCATCAAGGGGCGTGCCATGGAGCTATGCGTGCTCACTGCTCTATCTGTCAG
CC
ACTGATCA


dot-bracket secondary structure
.((..(((..(((((((((((((((((((((((((((((((.(((((((...))))))).))))))))).((...))))))))))).)))).))))))))
).
.)))..))



SIMILARITIES
miRBase ssp-MIR156: 0.00000002

PMRD zma-miR156i: 0.00000009

microPC miR156: 0.000000006
UniProt no hits

RFAM mir-156: 0.0000004
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;