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ABOUT THIS RECORD

ID: MNEST001435
species: Lotus japonicus
miRNA family: miR168a
source: miRNEST

Taxonomy by NCBI:
Lotus japonicus Lotus Loteae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCCGCCTTGCATCAACTGAAT

miRNA*
TCGCTTGGTGCAGGTCGGGAA

mismatches: 2
bulges: 0

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pre-miRNA
CTCTCTCGCTTCGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACCGCTGCTGCTTCTGCCGTTTTCGCGCGTAATCACTCACCGGAGGAGCGGTTACC
GCCGCCGGTTGGATCGGATCCCGCCTTGCATCAACTGAATCGGAACCCGCCTTGAAGCTTT


dot-bracket secondary structure
.......(((((((((..(((.(((((.((((((((((.(((((.(((......((...((((.....(((.((((((.(((.......))).)))))))
))...)))).))..))).))))).)))))))))).))))).)))..))))...)))))...



SIMILARITIES
miRBase gma-MIR168: 0.0000000000001

PMRD gma-miR168: 0.0000000000001

microPC miR168: 0.000002
UniProt no hits

RFAM MIR168: 0.00000000000004
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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