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ABOUT THIS RECORD

ID: MNEST001448
species: Lotus japonicus
miRNA family: MIR477
source: miRNEST

Taxonomy by NCBI:
Lotus japonicus Lotus Loteae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACTCTCCCTCAAGGGCTTCTT

miRNA*
GAGGCCCTTAGGAGGAGTTA

mismatches: 1
bulges: 1

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pre-miRNA
TTTGGTTGTTCACTCTCCCTCAAGGGCTTCTTAGCAGGACCATCTAATTAATGACCATTGGGTCCACGAACGAGCTAGGCAAGAGGCCCTTAGGAGGAGT
TA
ATAAGCTG


dot-bracket secondary structure
...(((((((.(((((.(((.(((((((((((.((.((....((........((((....)))).......)).))..)))))))))))))))).)))))
.)
)))).)).



SIMILARITIES
miRBase csi-MIR477b: 0.000001

PMRD aqc-miR477g: 0.00002

microPC no hits
UniProt no hits

RFAM MIR473: 0.00009
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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