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ABOUT THIS RECORD
ID:
MNEST001540
species:
Medicago sativa
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Medicago sativa
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATACTACCTCCGTCCCTAATT
miRNA*
TTANGGACNGAGGTAGTATCA
mismatches:
3
bulges:
0
View larger
pre-miRNA
ACGTTAAGAAG
ATACTACCTCCGTCCCTAATT
ATAAGACCCTTTTGAGAATTTTTTTTGTCCCTTTTTATAAGACCCCTTTGCTATTTCCAACTACATTA
ATTATTTCTTTACATACATGCCCCTTTTTATTATACATCTTTTTCTTCAATAAGCAATAAATAACATGTTGAAAACATAAACCAACCCTCTCTCTNNNGG
ATAAAATTGTAAAACCAATANTAATTACAAACATATTTAATACAAAATCCNCTATCTTAATTNCNNNTATTTTTNNAANGNTNCNATA
TTANGGACNGAG
GTAGTATCA
TGTATGAG
dot-bracket secondary structure
..........(
((((((((((.((((.((((.
..((((.....((((((.....((((((....((.(((.(((....((((...(((.((((....(((
.(((((.(((.........................................))).))))).)))...)))).)))..)))).......))).(((...))
).....((((((............))))))..)))...)).)))))).......)))))).........))))..............)
))).)))).)))
)))))))).
........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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