miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST001559
species: Mesostigma viride
miRNA family: MIRf1173
source: miRNEST

Taxonomy by NCBI:
Mesostigma viride Mesostigma Mesostigmataceae Mesostigmatales Mesostigmatophyceae Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTGTTGATTTTTGGGGCACGA

miRNA*
GCTTCAAGGGTCTCCGAAT

mismatches: 3
bulges: 2

View larger
pre-miRNA
TGTTGAATTGGAAAGCGAGATCGCTTCAAGGGTCTCCGAATAGCCAACTGATGCTGTTACAGTACCTCACCGTGGAGGTGAGGGTCGCAAGGATTAAGTA
TGGGATCGATGTCCCGATAGGCCTTGCCCTATTCTTAGCATAGGGTAGCTTTCTCATTCTTGTACCATGTATTATCTGTTGATTTTTGGGGCACGAGGCT
TGCTATCCATGAGGC


dot-bracket secondary structure
........((((.((((((.((((((((((((((..((.((((...((((.........)))).(((((((.....)))))))...(((.((..((((.(
((((((((......))).((((..((((((((.......)))))))))))))))))).))))..)).))).)))).))..))))))))))))..))..))
)))).))))......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;