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ABOUT THIS RECORD
ID:
MNEST001585
species:
Mimulus lewisii
miRNA family:
MIR156
source:
miRNEST
Taxonomy by NCBI:
Mimulus lewisii
Mimulus
Phrymaceae
Lamiales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGAGAGCACA
miRNA*
TGCTCTTCGTCTTCTGTCAAC
mismatches:
2
bulges:
0
View larger
pre-miRNA
AGGAAATTCGT
TGACAGAAGAGAGAGAGCACA
GGCTGCCATTGGCAAAGATTGTTTGCTTTTCGCGGGATTG
TGCTCTTCGTCTTCTGTCAAC
GACTAGT
C
dot-bracket secondary structure
.......((((
((((((((((..(((((((((
(.((((....((((((.....))))))....))))..)))
)))))))..))))))))))))
)).....
.
SIMILARITIES
miRBase
far-MIR156b
:
0.000001
PMRD
sin-miR157
:
0.000000001
microPC
miR157
:
0.00002
UniProt
no hits
RFAM
mir-156: 0.0003
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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