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ABOUT THIS RECORD
ID:
MNEST001601
species:
Nicotiana benthamiana
miRNA family:
MIR166
source:
miRNEST
Taxonomy by NCBI:
Nicotiana benthamiana
Nicotiana
Nicotianeae
Nicotianoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCC
miRNA*
AATGTTGTCTGGCTCGAGG
mismatches:
3
bulges:
0
View larger
pre-miRNA
TTCTATTGTGGGG
AATGTTGTCTGGCTCGAGG
AATCTTTAATCTTGATCAAATTCTTTACACAGATCTATCTATTATTATATATGTTGCTTATACATTTT
AGATCTTATATAGATCTATAATTGTTAGTTGTTAGATCTATGAATTTTGATTATATTTTTTTGGGTCG
TCGGACCAGGCTTCATTCC
CCTCAAAGAT
dot-bracket secondary structure
.(((.(((.((((
((((..((((((.((((.(
(.((...((...((((((((....((.((.(((((((..................(((...(((...(
((((((.....)))))))....))).)))...))))))).)))).))))))))....))...)).)).
)))).))))))..))))))
)).)))))).
SIMILARITIES
miRBase
aqc-MIR166e
:
0.000000003
PMRD
aqc-miR166e
:
0.000000003
microPC
miR166
:
1e-85
UniProt
no hits
RFAM
mir-166: 0.0000008
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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