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ABOUT THIS RECORD

ID: MNEST001602
species: Nicotiana benthamiana
miRNA family: miR166d
source: miRNEST

Taxonomy by NCBI:
Nicotiana benthamiana Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGAATGTTGTCTGGCTCGAGG

miRNA*
TCGGACCAGGCTTCATTCCCC

mismatches: 4
bulges: 0

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pre-miRNA
TTTCTATTGTGGGGAATGTTGTCTGGCTCGAGGAATCTTTAATCTTGATCAAATTCTTTACACAGATCTATCTATTATTATATATGTTGCTTATACATTT
TAGATCTTATATAGATCTATAATTGTTAGTTGTTAGATCTATGAATTTTGATTATATTTTTTTGGGTCGTCGGACCAGGCTTCATTCCCCTCAAAGATT


dot-bracket secondary structure
..(((.(((.((((((((..((((((.((((.((.((...((...((((((((....((.((.(((((((..................(((...(((...
(((((((.....)))))))....))).)))...))))))).)))).))))))))....))...)).)).)))).))))))..)))))))).))))))..



SIMILARITIES
miRBase aqc-MIR166e: 0.000000003

PMRD aqc-miR166e: 0.000000003

microPC miR166: 1e-85
UniProt no hits

RFAM mir-166: 0.0000008
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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