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ABOUT THIS RECORD

ID: MNEST001604
species: Nicotiana benthamiana
miRNA family: MIR169
source: miRNEST

Taxonomy by NCBI:
Nicotiana benthamiana Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAGCCAGGGATGACTTGCCGA

miRNA*
GGCAAGTTGTCCCTGGCTACA

mismatches: 1
bulges: 0

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pre-miRNA
GAAGAAATAGAGAGTGGATTGCAGCCAGGGATGACTTGCCGAGTATTTCTTTGTTTTAATTGCCTGTGGTTTACCAGGGATTTTATATCGGCAAGTTGTC
CCTGGCTACA
TTTCTCATGCAAGCCTCT


dot-bracket secondary structure
.........(((((.....((.(((((((((((((((((((((((.(((((.((...((((......)))).)).)))))...))).)))))))))))))
))))))).))
.)))))............



SIMILARITIES
miRBase vvi-MIR169s: 0.0000004

PMRD vvi-miR169s: 0.0000004

microPC miR169: 2e-43
UniProt no hits

RFAM MIR169_2: 0.000007
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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