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ABOUT THIS RECORD
ID:
MNEST001604
species:
Nicotiana benthamiana
miRNA family:
MIR169
source:
miRNEST
Taxonomy by NCBI:
Nicotiana benthamiana
Nicotiana
Nicotianeae
Nicotianoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAGCCAGGGATGACTTGCCGA
miRNA*
GGCAAGTTGTCCCTGGCTACA
mismatches:
1
bulges:
0
View larger
pre-miRNA
GAAGAAATAGAGAGTGGATTG
CAGCCAGGGATGACTTGCCGA
GTATTTCTTTGTTTTAATTGCCTGTGGTTTACCAGGGATTTTATATC
GGCAAGTTGTC
CCTGGCTACA
TTTCTCATGCAAGCCTCT
dot-bracket secondary structure
.........(((((.....((
.((((((((((((((((((((
(((.(((((.((...((((......)))).)).)))))...))).))
)))))))))))
))))))).))
.)))))............
SIMILARITIES
miRBase
vvi-MIR169s
:
0.0000004
PMRD
vvi-miR169s
:
0.0000004
microPC
miR169
:
2e-43
UniProt
no hits
RFAM
MIR169_2: 0.000007
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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