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ABOUT THIS RECORD
ID:
MNEST001608
species:
Nicotiana benthamiana
miRNA family:
MIRf890
source:
miRNEST
Taxonomy by NCBI:
Nicotiana benthamiana
Nicotiana
Nicotianeae
Nicotianoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCAGTGAGATTTGGAGAGTGG
miRNA*
ACTCTTATTCTTGTTGCTG
mismatches:
2
bulges:
2
View larger
pre-miRNA
GTGTGTTTTGTTTCATATGCT
GCAGTGAGATTTGGAGAGTGG
CTGTAAGATGAAAATGAGGGGCTATTCATTCTTTACTGCT
ACTCTTATTCTTGTTGCT
G
TTTCCATTTTTCTTAGCT
dot-bracket secondary structure
((((((........)))))).
(((((((((....((((((((
(.(((((.....((((((......)))))).))))).)))
))))))..))))))))).
.
..................
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
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