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ABOUT THIS RECORD

ID: MNEST001618
species: Nicotiana tabacum
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Nicotiana tabacum Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTACTCCCTCCGTTCCAATTT

miRNA*
 ATTGAAACGGAGGGAGTATCA

mismatches: 4
bulges: 0
View larger
pre-miRNA
 AGCTAAAACTGCTACTCCCTCCGTTCCAATTTATATGAACTTGTTTGACTGGGAACGGAGTTTAAGAAAAAATAAAGACTTTTAGAATTGGTGATCCTAA
AGAAATAAAAAATGGGTTTAAAGTATTTGTGTGGTTATAATAGCTTTTCATTAAGGGTAAAATTGTAAGTTTACACTAAATTGTTTCGAAATTTAGAAAG
AGGTCATACCTTTTTGCAACGGACCAAAAAGAAAATAGGTTCACACATATTGAAACGGAGGGAGTATCAGGTAATTT

dot-bracket secondary structure
........(((.(((((((((((((.((((.....(((((((((((..((.((..((((((((..((((.((((((.(((((.((.(((.((..((....
.)).))....)))...)).))))).)))(((((((((((((.((((((....))))))...)))))))..))))))...))).)))).))))))..((((
((((...))))))))....))..))....)).))))))))))).....)))).))))))))))))).))).......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM MIR1122: 0.0003		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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