miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST001674
species:
Nuphar advena
miRNA family:
MIR390
source:
miRNEST
Taxonomy by NCBI:
Nuphar advena
Nuphar
Nymphaeaceae
Nymphaeales
basal Magnoliophyta
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAGCTCAGGAGGGATAGCGCC
miRNA*
CGCTGTCTATCCTGAGCATTA
mismatches:
2
bulges:
0
View larger
pre-miRNA
CAGCAGCAATGAGAAGCTCTA
AAGCTCAGGAGGGATAGCGCC
TAACAGTGATTTGGAAACTGTATATATATGTATATATATGGTGAAGCATGAGCATGGG
TGG
CGCTGTCTATCCTGAGCATTA
TGGTTTCTTACTTGCTTT
dot-bracket secondary structure
....((((((((((((((.((
(.((((((((.((((((((((
..((.(((.((((...(((((((((((....)))))))))))......)))))))..)
)))
)))))))).)))))))).)))
.))))))))).)))))..
SIMILARITIES
miRBase
tcc-MIR390b
:
0.000002
PMRD
bna-miR390c
:
0.000002
microPC
miR390
:
0.000000000000008
UniProt
no hits
RFAM
MIR390: 0.00003
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record