miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST001697
species: Panicum virgatum
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTACTCCTTTCGTTCCAAATT

miRNA*
TTTGGAACGGAGGAGTAGTT

mismatches: 0
bulges: 1

View larger
pre-miRNA
AAAGTAGTATACTACTCCTTTCGTTCCAAATTATAAGACATTCCAACAATCTTGAAGAGTCAAAGTTTTTATATTTGACCAAATTTATATAATAGAATAA
TAATATTTATTATATAAACTAAGTACCATTAGATTTTTTATTAGTTATATTTTCATAGTACATCAATTTGATATCATAAATCTTTATATTTCTCTCTATA
ATCTTGGTCAAACTTGAGATTGATTTGACTCTCCAAGATTCTTGGAATGTCTTATAATTTGGAACGGAGGAGTAGTTCTAAATCG


dot-bracket secondary structure
....(((...((((((((((.(((((((((((((((((((((((((.(((((((.(((((((((..(((((..(((((((((..(((((....((((..(
(((.((((((.((((.......((((.((.(((.....(((.....))).))).)).)))).........)))).))))))..))))..))))...))))
)..)))))))))..)))))....))))))))).))))))).))))))))))))))))))))))))))))))))))).))).....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM MIR1122: 0.00000007
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;