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ABOUT THIS RECORD

ID: MNEST001777
species: Panicum virgatum
miRNA family: miR167g
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGTCATGCTGTAGTTTCATCT

miRNA*
GTGAAGCTGCCAGCATGATCTG

mismatches: 1
bulges: 1

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pre-miRNA
GGTAGCGGTGCTCCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGGTATGATATGCTTTTACCTCGATCTCCTCCTGATCGCCGAGGACGAATTCAGG
ATAGGGGAAAGAGGAATAATAAGCGTCAGGTCATGCTGTAGTTTCATCTGCTGGTGGGTGCACAACGA


dot-bracket secondary structure
.......(((((((((.(((.(((((((((((.((((((((((((..........(((((...((((..((((((((((((((.......)))..)))))
)..)))))..))))......)))))))))))))))))))))))))))).))).))))).)))).....



SIMILARITIES
miRBase sbi-MIR167e: 4e-17

PMRD sof-miR167b: 4e-17

microPC miR167: 0.000000009
UniProt no hits

RFAM MIR167_1: 0.00000000000001
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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