miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST001779
species: Panicum virgatum
miRNA family: miR167g
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGTCATGCTGTAGTTTCATCT

miRNA*
 GTGAAGCTGCCAGCATGATCTG

mismatches: 1
bulges: 1
View larger
pre-miRNA
 GTGCTCCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGGTATGATATGCTTTATTTTACCTCTCTCCCTGATTGCCAAGGACGAATTCAGAGATTCGG
GGAGAGAGGAATAGGCGTCAGGTCATGCTGTAGTTTCATCTGCTGGTGGGTGC

dot-bracket secondary structure
((((.((((.(((.(((((((((((.((((((((((((..........(((((....((.(((((((((((((........((.....))......))))
))))))))))).)))))))))))))))))))))))))))).))).))))))))


SIMILARITIES
miRBase sof-MIR167b: 0.000000000000008

PMRD sof-miR167b: 0.000000000000008

microPC miR167: 0.0000001		UniProt no hits

RFAM MIR167_1: 0.00000000001		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;