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ABOUT THIS RECORD

ID: MNEST001788
species: Panicum virgatum
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTACTCCCTCCGTTCCAAATT

miRNA*
TTTAGAACGGAGTGAGTATTA

mismatches: 2
bulges: 0

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pre-miRNA
TTTTTACCGAGGTACTCCCTCCGTTCCAAATTATAAGTCACTCCAAGAATCTTGGAGAGTCAAAATTTTTCAAGTTTGACCAAATTTATATGATAAGCTA
ATAACATTTATGATACCAATTAAGTATTATTAGATTCTTTGTTAGCTATATTTTCATAGTGCACCTATTTGATGTCACAAATCTTTATATTTTTGTCTAT
AATTTTGGTCAAATTTTAAGATGGTTTGACTCTTTAAAATTCCTAGAATGACTTTAATTTAGAACGGAGTGAGTATTAGAAAGCAG


dot-bracket secondary structure
..........(((((((.((((((((.((((((.((((((.((...((((.(((((((((((((..((((.(((((((((((((.(((((.((((((...
..((.((((.(((((.(((.((.(((((((.(((.....(((.....))).))).)))))))...)).))).))))).)))).))......)))))))))
)).))))))))))))).))))...))))))))))))).))))...)).)))))))))))).)))))))).))))))).........



SIMILARITIES
miRBase no hits

PMRD osa-miRf11316-akr: 0.0002

microPC miR1439: 0.0002
UniProt no hits

RFAM MIR1122: 0.00000000007
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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