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ABOUT THIS RECORD

ID: MNEST001822
species: Panicum virgatum
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCTCCCTCCGTTCCAAAATTA

miRNA*
ATTTAGGACGGGGGGAGTAT

mismatches: 1
bulges: 1

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pre-miRNA
CTGTATATACATACTGCTCCCTCCGTTCCAAAATTATTAATCATTCAAGTTTTATTTAAATACATACACCCAGGAAAACTAAAGTGACTAATAATTTAGG
ACGGGGGGAGTAT
ATATGAATGTTT


dot-bracket secondary structure
....((((.((((.((((((((((((.((.(((((((((.(((((..((((((.....................))))))..))))).))))))))).))
)))))))))))).
.)))).))))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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