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ABOUT THIS RECORD
ID:
MNEST001822
species:
Panicum virgatum
miRNA family:
MIR1120
source:
miRNEST
Taxonomy by NCBI:
Panicum virgatum
Panicum
Paniceae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCTCCCTCCGTTCCAAAATTA
miRNA*
ATTTAGGACGGGGGGAGTAT
mismatches:
1
bulges:
1
View larger
pre-miRNA
CTGTATATACATACT
GCTCCCTCCGTTCCAAAATTA
TTAATCATTCAAGTTTTATTTAAATACATACACCCAGGAAAACTAAAGTGACTAATA
ATTTAGG
ACGGGGGGAGTAT
ATATGAATGTTT
dot-bracket secondary structure
....((((.((((.(
(((((((((((.((.((((((
(((.(((((..((((((.....................))))))..))))).)))))
)))).))
)))))))))))).
.)))).))))..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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