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ABOUT THIS RECORD

ID: MNEST001828
species: Panicum virgatum
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCACA

miRNA*
TGCTTACTCCTCTTTCTGTCAGC

mismatches: 2
bulges: 2

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pre-miRNA
TCTTGGGAGATTGACAGAAGAGAGTGAGCACACGGCGTGATGAACAGCATAACATGTATGTTGTTCTCACCGCGTGCTTACTCCTCTTTCTGTCAGCCTC
TCTTT


dot-bracket secondary structure
....(((((.((((((((((.((((((((((.(((..(((.((((((((((.....)))))))))))))))).))))))))))...)))))))))).)))
))...



SIMILARITIES
miRBase zma-MIR156d: 1e-22

PMRD zma-miR156d: 1e-22

microPC miR156: 1e-18
UniProt no hits

RFAM mir-156: 7e-21
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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