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ABOUT THIS RECORD

ID: MNEST001879
species: Parthenium argentatum
miRNA family: MIR396
source: miRNEST

Taxonomy by NCBI:
Parthenium argentatum Parthenium Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCCACGGCTTTCTTGAACTG

miRNA*
GTTCAATAAAGCTGTGGGAAG

mismatches: 1
bulges: 0

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pre-miRNA
ATAATGGTGCTCTTTCTATTCTTCCACGGCTTTCTTGAACTGCATGGGTTTTGATCTGTCAGATCTGTGTTTTTTTATATAATCTTTGCGGTTCAATAAA
GCTGTGGGAAG
ATAGAGACAGTATCAAAA


dot-bracket secondary structure
....(((((((.((((((((.((((((((((((.((((((((((.(((((..(((((...)))))...............))))).)))))))))).)))
))))))))).)
))))))).)))))))...



SIMILARITIES
miRBase ath-MIR396a: 0.0000000001

PMRD ath-miRf11010-akr: 0.000000000007

microPC miR396: 5e-25
UniProt no hits

RFAM MIR396: 0.0000000005
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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