miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST001902
species: Phaseolus acutifolius
miRNA family: miR3951
source: miRNEST

Taxonomy by NCBI:
Phaseolus acutifolius Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GAGATAAAGATGAGAGAAGAG

miRNA*
CCGTTTCTTCTTTTCTTTCTTTCTT

mismatches: 3
bulges: 1

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pre-miRNA
GAAAAAAGAGCTAAAGAAAGGGATAGAAAGAGAGATAAAGATGAGAGAAGAGCTGGAGAGGACTAAAGAGAGGTTAAGGTTGGTTGAAGACGCTGAGGAG
ATGCTCTGTTCGCAATTGGGCGAGCTCGAGGCTGAGGCCGTCATGCACGCTCGSCAGTACCAACTCCGCGTCGCCGAGCTCTCCGATCAGCTCGCCCGCG
CTCTCCAGAGATAGCGCCCAGATTGATCTGGATCTCTTGCGCCGTTTCTTCTTTTCTTTCTTTCTTGTTTTTTTAATTTGTTTGGTTT


dot-bracket secondary structure
.......((((((((.(((..((.((((.((((((.(((((.((((((((.((.(((((.((((.......))))..(((.((((((.........((((
(.((((.((.(((...((((((.((..(((((....))).))..)).))))))..(((....)))..)))..)).)))))))))..)))))).))).(((
((.((....)).)))))(((((....))))).))))).))....)))).)))).))))).)))))).)))).))..))).))))))))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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