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ABOUT THIS RECORD

ID: MNEST001931
species: Picea engelmannii x Picea glauca
miRNA family: MIRf419
source: miRNEST

Taxonomy by NCBI:
Picea engelmannii x Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCCACGGCTTTCTTGAGCTTC

miRNA*
AGTTCAAGAAAGCCGTGGAA

mismatches: 0
bulges: 1

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pre-miRNA
CCTTTAATATTCTTCCCACGGCTTTCTTGAGCTTCGTATGCGGATCTGTTAGCGGTGCGATCTGTCGCCAACACTCCCGATCGGGAAGTTCAAGAAAGCC
GTGGAA
AAATATGAGAG


dot-bracket secondary structure
.((((.(((((.((((.((((((((((((((((((.....(((...((((.((((.........)))).))))...))).....))))))))))))))))
))))))
.))))).))))



SIMILARITIES
miRBase pab-MIR396c: 5e-62

PMRD ptc-miRf10517-akr: 0.000006

microPC miR396: 1e-47
UniProt no hits

RFAM MIR396: 0.000002
most similar mature miRNAs

Identical with: pab-MIR396c from miRBase (MNEST039381)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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