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ABOUT THIS RECORD

ID: MNEST001992
species: Picea sitchensis
miRNA family: MIR395
source: miRNEST

Taxonomy by NCBI:
Picea sitchensis Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATGAAGTGTTTGGAGAAACTC

miRNA*
TGTTTCTCCCATCACTTTGAAA

mismatches: 5
bulges: 0

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pre-miRNA
ACTCACTCTTTGTTGTTTCTCCCATCACTTTGAAATAAAAACCAAACAATAAGAGGTACAAAGAAGGTGTACTAACTTTCTGAGAATTGCGACAAATTTT
CCATTCGGGTCCAGCAATGCAACGTCATTCGAGTGCCCGATTGCTTCCTTCTGCAGGTCATCAATGGCCAATACAATCGGTACCGACATATTGACAACTG
AACCATCCTGCAGCCTGAGGGAATTGAAATGAAGTGTTTGGAGAAACTCGGCCTGTCTC


dot-bracket secondary structure
....((...(((..((((((((...(((((((...(((..(((...........)))....(((((((......)))))))(((((((......))))))
)((.((((((.....((((......)))).....)))))).)).(((((((((((((...(((.((..(((((...(((....)))..))))).))..))
).....)))))))...)))))).)))...)))))))...)))))))).)))...))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q9S7D8|APS4_ARATH: 2e-16

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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