miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST002000
species: Picea sitchensis
miRNA family: miR950-5p
source: miRNEST

Taxonomy by NCBI:
Picea sitchensis Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCACATCTGGGCCACGATGGTT

miRNA*
CCATGGTGCCCCAGATGAGAAG

mismatches: 3
bulges: 0

View larger
pre-miRNA
AAGAGGTTTTGGAGGTGATCTTCACATCTGGGCCACGATGGTTTATTTTTCTTCGTTTATTTATCATAAACCATGGTGCCCCAGATGAGAAGAGCACCTT
CGCCTCCGTT


dot-bracket secondary structure
..(((((...(((((((.(((((.((((((((.(((.(((((((((...................))))))))).))).)))))))).))))).))))))
))))))....



SIMILARITIES
miRBase pab-MIR950: 6e-58

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

Identical with: pab-MIR950 from miRBase (MNEST039389)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;