miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST002011
species: Picea sitchensis
miRNA family: miR3699
source: miRNEST

Taxonomy by NCBI:
Picea sitchensis Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GACAGAAGATAGACTTTGGTC

miRNA*
CCAGAGTCCATCTTTGTCAA

mismatches: 1
bulges: 1

View larger
pre-miRNA
GGCAAAGGTGTCTTGTTTCCAGTTGTTTCTTGACAGAAGATAGACTTTGGTCCTATGGAGAAACAAGAAGGGCAAGGTTAAGGGCAAGTTTCGCCATATC
AGGTGACCAGAGTCCATCTTTGTCAAGAAACAAGGATCAAGTAACAAACACTTG


dot-bracket secondary structure
.....((((((((((..(((..(((((((((((((.(((((.((((((((((((((((.(((((.......((..........))..))))).))))...
.)).)))))))))).))))))))))))))))))))).))))......)))))).



SIMILARITIES
miRBase pab-MIR3699: 3e-30

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;