ABOUT THIS RECORDspecies: Pinus banksiana
miRNA family: miR950-5p
source: miRNEST
Taxonomy by NCBI:
Pinus banksiana Pinus Pinus Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTACATCTGGGCCACGATGGT miRNA* AATCGTGCCGCAGATGATAAG mismatches: 3 bulges: 2 |
pre-miRNA
AAGAGGTTTGGAAGGTGATCTTTACATCTGGGCCACGATGGTTTATTGTTCATCATCTGTTTGTGATAGACAATCGTGCCGCAGATGATAAGAGCACCTT
CGCCTTCGCT
dot-bracket secondary structure
..(((((...(((((((.((((..(((((((((.(((((.(((((((((.((.....))...))))))))).)))))))).))))))..)))).))))))
))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
AAGAGGTTTGGAAGGTGATCTTTACATCTGGGCCACGATGGTTTATTGTTCATCATCTGTTTGTGATAGACAATCGTGCCGCAGATGATAAGAGCACCTT
CGCCTTCGCT
dot-bracket secondary structure
..(((((...(((((((.((((..(((((((((.(((((.(((((((((.((.....))...))))))))).)))))))).))))))..)))).))))))
))))))....
SIMILARITIES| miRBase pab-MIR950: 4e-19 PMRD pta-miR950b: 0.000000000001 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
