miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST002038
species:
Pinus taeda
miRNA family:
MIR951
source:
miRNEST
Taxonomy by NCBI:
Pinus taeda
Pinus
Pinus
Pinaceae
Coniferales
Coniferopsida
Coniferophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGTTCTTGACGTCTGGACCAC
miRNA*
GGTTCAGTCATCAAGAACACC
mismatches:
4
bulges:
0
View larger
pre-miRNA
AAGAGGAAGAGGAAGCGATGG
TGTTCTTGACGTCTGGACCAC
GAGGGTTTGCGTTACGTTGGGCATGAATAAACAATCATCTACCGC
GGTTCAGTCATCA
AGAACACC
TTTGCTTTCATTTACATG
dot-bracket secondary structure
..........((((((((.((
(((((((((...(((((((.(
((((..(((..(((..(((....))).))).)))...)))..)).
)))))))...)))
))))))))
.)))))))).........
SIMILARITIES
miRBase
pta-MIR951
:
4e-50
PMRD
pta-miR951
:
4e-50
microPC
miR951
:
4e-38
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record