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ABOUT THIS RECORD
ID:
MNEST002071
species:
Pisum sativum
miRNA family:
MIRf261
source:
miRNEST
Taxonomy by NCBI:
Pisum sativum
Pisum
Fabeae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGTTGGAGCTGTGTCAAACCC
miRNA*
GTTGACATTCTCTTGCTTG
mismatches:
3
bulges:
2
View larger
pre-miRNA
CTTGATTATCT
AGTTGGAGCTGTGTCAAACCC
CAAGAAACCGTTTGCTGCCATTGTTGGTGGTTCTAAGGTGTCTTCCAAGATTGGAGTTATTGAATCCT
TGTTGGAGAAG
GTTGACATTCTCTTGCTTG
GTGGAGGA
dot-bracket secondary structure
.....(((((.
(((.((((..(((((((.((.
..(((.(((....(((((((....))))))).....))).)))(((((....(((.........))).
..)))))...)
)))))))).)))).))).)
))))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q42962|PGKY_TOBAC: 3e-17
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record