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ABOUT THIS RECORD
ID:
MNEST002170
species:
Populus tremula x Populus alba
miRNA family:
MIRf1215
source:
miRNEST
Taxonomy by NCBI:
Populus tremula x Populus alba
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCTGGTCATTTTGTTTATAGG
miRNA*
TGTGAACATCTTGACCAGGGG
mismatches:
3
bulges:
0
View larger
pre-miRNA
ACATTAACATC
CCTGGTCATTTTGTTTATAGG
ACTCGGTTTTCAAGGACTTCTGGGAANAGCTTTCTTTTGCCACAATGCAGGACAGATGTATTATACGT
GTCTGATCCC
TGTGAACATCTTGACCAGGGG
GATNAAGG
dot-bracket secondary structure
.........((
((((((((...((((((((((
....(((.(((.(((...)))..)))..)))...((((((......))))))((((((((...)))).
.))))...))
))))))))...))))))))))
........
SIMILARITIES
miRBase
no hits
PMRD
ptc-miRf11908-akr
:
6e-65
microPC
no hits
UniProt
sp|Q9LF38|EDL1_ARATH: 0.000000000000001
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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