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ABOUT THIS RECORD
ID:
MNEST002184
species:
Populus tremula x Populus alba
miRNA family:
MIRf153
source:
miRNEST
Taxonomy by NCBI:
Populus tremula x Populus alba
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGGATTTCAGGTTGACCGAA
miRNA*
TGGTTAAAGGGAATCTCCAT
mismatches:
3
bulges:
1
View larger
pre-miRNA
TCATGTAACTT
TGGTTAAAGGGAATCTCCAT
A
TGGGATTTCAGGTTGACCGAA
TTACACAC
dot-bracket secondary structure
...(((((.((
(((((((..((((((((...
.
.))))))))...)))))))))
)))))...
SIMILARITIES
miRBase
no hits
PMRD
ptc-miRf11671-akr
:
5e-17
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record