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ABOUT THIS RECORD

ID: MNEST002184
species: Populus tremula x Populus alba
miRNA family: MIRf153
source: miRNEST

Taxonomy by NCBI:
Populus tremula x Populus alba Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGGATTTCAGGTTGACCGAA

miRNA*
TGGTTAAAGGGAATCTCCAT

mismatches: 3
bulges: 1

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pre-miRNA
TCATGTAACTTTGGTTAAAGGGAATCTCCATATGGGATTTCAGGTTGACCGAATTACACAC

dot-bracket secondary structure
...(((((.(((((((((..((((((((.....))))))))...))))))))))))))...


SIMILARITIES
miRBase no hits

PMRD ptc-miRf11671-akr: 5e-17

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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