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ABOUT THIS RECORD

ID: MNEST002187
species: Populus tremula x Populus tremuloides
miRNA family: MIRf746
source: miRNEST

Taxonomy by NCBI:
Populus tremula x Populus tremuloides Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGGCGGTGATTGAACGGAGG

miRNA*
TTCTTTACTTACCGTCTTAC

mismatches: 3
bulges: 1

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pre-miRNA
TTAGTTTGATTGGAAGAACTTGACCGTTGGATTGGCGGTGATTGAACGGAGGGTCGATCCTTCTTTACTTACCGTCTTACAGAAGTCAACATTCTATTAA
GGCATATC


dot-bracket secondary structure
...((((...(((((....(((((..(((....((((((((.((((.((((((....)))))))))).))))))))...)))..)))))..)))))...)
))).....



SIMILARITIES
miRBase no hits

PMRD ptc-miRf10132-akr: 6e-18

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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