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ABOUT THIS RECORD
ID:
MNEST002247
species:
Prunus persica
miRNA family:
MIR2673
source:
miRNEST
Taxonomy by NCBI:
Prunus persica
Prunus
Amygdaleae
Spiraeoideae
Rosaceae
Rosales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCTCTTCCTCTTCTTCTTCTT
miRNA*
GAGAGTTTGGGAGGAGGTT
mismatches:
4
bulges:
2
View larger
pre-miRNA
CATATTCCCAA
GCTCTTCCTCTTCTTCTTCTT
CCTTTGCCATGTCAACTGAATCTTCTGGAAAAGTGAAAGTAGAAGGGGAGTGCATTCATTTCGGTGGA
GAAATCGAGTAGGGGTGCATTTCTGTAAATACTTGGGATTCTTTGGGCTAACATTTTCGGTTTAGGTGGTGAAAGAA
GAGAGTTTGGGAGGAGGTT
AGGA
TTAA
dot-bracket secondary structure
..((.(((.((
.((((((((...(((..((((
(.((((((((...(((((((.....(((.((((...(((((....((((((((((((..((((((...
...))))))...)))))))))))).....)))))......))))...))).....)))))))...)))))))).)))
)))))...)))))))).))
.)))
.)).
SIMILARITIES
miRBase
aly-MIR159b
:
0.0006
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
degradome data
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