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ABOUT THIS RECORD
ID:
MNEST002273
species:
Pseudoroegneria spicata
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Pseudoroegneria spicata
Pseudoroegneria
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCCCTCCGTCCCTTAATG
miRNA*
CTATGGGACGGAGGGAATCTC
mismatches:
5
bulges:
0
View larger
pre-miRNA
TGCTAAAAAC
TACTCCCTCCGTCCCTTAATG
CAAGACGTTTTTTTGACA
CTATGGGACGGAGGGAATCTC
CAACTCG
dot-bracket secondary structure
..........
...((((((((((((.((.((
(((((.....))))).))
.)).)))))))))))).....
.......
SIMILARITIES
miRBase
osa-MIR1436
:
0.0009
PMRD
osa-miRf12035-akr
:
0.0009
microPC
miR1436
:
0.0009
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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