ABOUT THIS RECORDspecies: Pseudoroegneria spicata
miRNA family: MIR1436
source: miRNEST
Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACACTATGGGACGGAGGGAAT miRNA* TCCCTCCGTCCCTTAATGCAA mismatches: 5 bulges: 0 |
pre-miRNA
GCTAAAAACTACTCCCTCCGTCCCTTAATGCAAGACGTTTTTTTGACACTATGGGACGGAGGGAATCTCCAACTC
dot-bracket secondary structure
............((((((((((((.((.(((((((.....))))).)).)).))))))))))))...........
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCTAAAAACTACTCCCTCCGTCCCTTAATGCAAGACGTTTTTTTGACACTATGGGACGGAGGGAATCTCCAACTC
dot-bracket secondary structure
............((((((((((((.((.(((((((.....))))).)).)).))))))))))))...........
SIMILARITIES| miRBase osa-MIR1436: 0.0008 PMRD osa-miRf12035-akr: 0.0008 microPC miR1436: 0.0008 | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
